Identify Metabolic Subpathways Mediated by MicroRNAs


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Documentation for package ‘SubpathwayGMir’ version 1.0

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SubpathwayGMir-package The SubpathwayGMir package
getBackground Get the background of molecules
getInteGraphList Get the reconstructed metabolic pathway graphs
GetK2riData Get the environment data
getLocSubGraph Get the located metabolic subpathways
identifyGraph Annotate and identify subpathways
initializeK2ri Initialize environment variable k2ri
plotGraph Visualize a pathway graph
printGraph Print the results of graph annotation and identification
SubpathwayGMir The SubpathwayGMir package
updateOrgEnvir Update the organism-specific environment variables